Restorative Medicine Logo
Root Causes

Inflammation, Neurotransmitters, and the IDO Enzyme: Why Amino Acid Supplements Won’t Work Until You Fix the Root Cause

Published on
March 27, 2025

Think of your brain like a well-organized city, where neurotransmitters act as messengers making sure traffic flows smoothly. Some neurotransmitters, like serotonin and dopamine, keep the mood balanced and motivation high. Others, like glutamate and GABA, maintain the balance between excitement and calm—kind of like a city’s traffic signals. But when inflammation takes over, it’s like a traffic control meltdown—routes get blocked, detours go haywire, and the whole system stops working properly.

At the center of this biochemical traffic jam is the IDO (Indoleamine 2,3-Dioxygenase) enzyme, which redirects neurotransmitter production in a way that can cause mood issues, brain fog, anxiety, and fatigue.

How Inflammation Hijacks Serotonin and Dopamine via the IDO Enzyme

Under normal circumstances, the amino acid tryptophan is used to make serotonin (the "feel-good" neurotransmitter that regulates mood, sleep, and well-being). However, when inflammation is present, IDO gets activated and reroutes tryptophan down a different path—the kynurenine pathway.

Why This Is a Problem

  • Less serotonin gets produced, which can lead to depression, anxiety, and insomnia.
  • The kynurenine pathway produces neurotoxic byproducts, such as quinolinic acid, which contributes to brain inflammation, excitotoxicity, and cognitive dysfunction.
  • Dopamine production is also affected, making motivation, focus, and energy levels take a nosedive.

Why Supplementing with Amino Acids (Tryptophan, 5-HTP, Tyrosine) Won’t Work

A common approach to neurotransmitter imbalances is to take amino acid precursors like:

  • 5-HTP or Tryptophan to boost serotonin
  • Tyrosine or L-DOPA to increase dopamine

However, if inflammation is still present, these supplements won’t work as intended because IDO is still in control of tryptophan metabolism, meaning any tryptophan you add will still get redirected toward neurotoxic byproducts instead of serotonin.

Trying to increase serotonin in an inflamed brain is like pouring more cars onto an already jammed-up highway—they’ll just get rerouted into a mess of unintended consequences.

The Glutamate-GABA Imbalance: How Inflammation Makes the Brain Overexcited

Beyond serotonin and dopamine, inflammation also throws off the balance between glutamate and GABA—the two main players in brain excitability and relaxation.

  • Glutamate is the brain’s main excitatory neurotransmitter—it helps with focus, memory, and learning, but too much of it can lead to anxiety, restlessness, and even neurotoxicity.
  • GABA is the main calming neurotransmitter, responsible for relaxation and sleep. It’s like the brake pedal to glutamate’s gas pedal.

How Inflammation Disrupts This Balance

  1. Chronic inflammation increases glutamate and decreases GABA, leading to a hyper-excitable nervous system. This can cause:
    • Anxiety, panic, irritability
    • Brain fog and cognitive dysfunction
    • Sleep disturbances and restlessness
    • Increased sensitivity to stimuli (light, sound, stress, etc.)
  2. The kynurenine pathway (activated by IDO) produces quinolinic acid, which acts as an excitotoxin—essentially overstimulating neurons to the point of damage.
  3. GABA production drops, making it harder to calm down, sleep, or relax.

Why Taking GABA Supplements Often Fails

Many people turn to GABA supplements to calm the nervous system, but most oral GABA supplements don’t cross the blood-brain barrier effectively. Even if they did, as long as inflammation is present, the body remains stuck in an overexcited state—meaning GABA simply can’t do its job properly.

What Needs to Happen First? Reduce Inflammation!

Instead of throwing amino acids into a broken system, the first step to fixing neurotransmitter imbalances is to address the root cause: inflammation. This means:

  • Identifying and addressing chronic infections, toxins, or immune dysfunction (which keep IDO activated).
  • Supporting detox pathways to clear inflammatory byproducts.
  • Balancing glutamate and GABA naturally through lifestyle changes, stress management, and nutrition.
  • Regulating immune function so that neurotransmitter production can return to normal.

Once inflammation is under control, the brain’s chemistry will begin to self-correct, and only then will amino acid supplementation be truly effective.

Final Thoughts

If you’re dealing with chronic mood issues, anxiety, brain fog, or fatigue, and neurotransmitter-boosting supplements aren’t working, inflammation is likely blocking the pathway. Instead of focusing solely on boosting neurotransmitters, addressing the inflammation first will restore balance naturally, allowing serotonin, dopamine, and GABA to work as they should.

Share this post
Root Causes

Start Your Healing Journey Today

Discover how we address root causes for true healing and personalized wellness solutions.